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AMP 2009
Annual Meeting & Exhibits
Corporate Workshops on Thursday, November 19, 2009
Abbott
Molecular, Inc 1
The PLEX-ID Rapid Bioidentification
System: A Revolutionary New Tool for Global Surveillance
This symposium will highlight the newest addition to Abbott
Molecular’s growing portfolio of molecular technologies for
research use – the Research Use Only (RUO) PLEX-ID Rapid
Bioidentification System. This technology, which is not
cleared by the Food and Drug Administration for any clinical
application, was developed to detect low-abundance and mixed
infections, as well as identify new genetic variants without
prior knowledge of viral sequence. These features, combined
with the ability to process hundreds of samples per day,
would allow the system to monitor the evolution of
infectious organisms during an outbreak. The discussion
will focus on the use of the RUO PLEX-ID Influenza
Surveillance Kit for tracking the spread and evolution of
influenza viruses.
Abbott Molecular, Inc 2
Advances in Flu and Other
Respiratory Viral Testing
This session will focus on using the xTAG Respiratory Viral
Panel for better decision-making in patient management and
limiting the spread of infection. There will be discussions
on its value in both clinical settings and as a surveillance
tool.
Abbott Molecular, Inc 3
The Abbott m2000 RealTime System: Improving
Laboratory Workflow and Confidence in Result Reporting
This session will focus on the description of the
technology, assay design, m2000 menu and capabilities as
well as results from external studies worldwide
Abbott Molecular, Inc 4
Primary Human Epidermal Growth
Factor Receptor-2 (HER-2) Testing by Fluorescent In Situ
Hybridization (FISH)
This session will focus on current testing guidelines for
HER-2 with particular emphasis on biologic and methodologic
considerations.
AcroMetrix
Innovative Molecular Technologies for
Standardized Quality Control in Assay Development
AcroMetrix will share exciting new technologies that can
help IVD manufacturers accelerate product development and
time to market through OEM opportunities. SynTura(TM)
technology was developed to fill the need for high titer,
stable, and reproducible material for calibration and
quality control of RNA targets. The technology provides a
cassette-based system whereby desired viral target sequences
can be introduced into an intact RNA virus. These hybrid
viruses are useful for the development of assay calibrators,
external run controls, internal controls, and quantitation
standards. This workshop will also present the design of a
reproducible synthetic KRAS FFPE tissue control based on the
ISO 17511 standard. The synthetic KRAS FFPE control can be
adjusted with varying ratios of mutant to wildtype and total
cell concentration per section. Compared to the limited
number of KRAS sections from patient specimen blocks, a
synthetic KRAS control allows for a limitless supply of
reproducible material.
Affymetrix, Inc
Advances in Array Based Molecular Diagnostics
Affymetrix invites you to join us in a discussion on novel
molecular diagnostic products and applications being
developed utilizing the GeneChip platform. Our Powered by
Affymetrix speakers will focus on the clinical utility,
workflow, clinical studies and validation, of their tests as
well as sharing their experiences in novel array based
molecular diagnostic test development. Please join us to
learn more about these exciting new products and
applications using GeneChip technology.
Applied Biosystems
Essential Tools from Genetic Validation to
Molecular Diagnostics
DNA sequencing and fragment sizing applications using
capillary electrophoresis are essential tools for
discovering genetic variations for investigating disease
conditions or researching susceptibility. Applied
Biosystems introduces the 3500 Series Genetic Analyzers,
supporting the needs of process-controlled environments1.
Applied Biosystems also introduces the 7500 Fast Dx
Real-Time PCR Instrument, delivering high-quality results in
a flexible 96-well format. Available for in vitro
diagnostic use in the United States, the 7500 Fast Dx
Instrument may support regulatory clearance for assays2. FOR
RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES.1For
those who require IVD-marked devices, the 3500 Dx and 3500xL
Dx Genetic Analyzers and system accessories meet the
requirements of the In Vitro Diagnostic Medical Devices
Directive (98/79/EC). The 3500 Dx and 3500xL Dx systems are
for distribution and use in specific European countries
only. For more information about the 3500 Dx Series Systems,
contact your Applied Biosystems representative.2The customer
is responsible for any validation of assay, and compliance
with any regulatory requirements that pertain to their
procedures and instrument use.The trademarks mentioned
herein are the property of either Life Technologies
Corporation, Applied Biosystems/MDS Analytical Technologies
or otherwise, their respective owners. © 2009 Applied
Biosystems LLC and MDS Inc. Joint Owners. All Rights
Reserved.
Asuragen, Inc 1
Molecular Approaches for Examing Neoplastic Disease in
Solid Tumors, Including KRAS Mutations in Lung and Colon and
Measuring miRNA Levels in Tissue.
Asuragen, Inc. is a fully integrated diagnostic company
dedicated to providing diagnostic solutions for molecular
oncology and genetic testing. Adding to our existing
leukemia portfolio, Asuragen has recently launched our first
mutliplex solid tumor assay, called Signature KRAS Mutations
(RUO) for the detection of 7 somatic mutations in the kras
oncogene. This workshop will present preliminary data from
the Signature KRAS Mutations assay on DNA extracted from
both colon and lung FFPE samples. We will also present
updates on our CLIA laboratory cancer miRNA tests.
Asuragen, Inc 2
Innovations in Fragile X and FMR1 Gene Testing
Asuragen, Inc. is a fully integrated diagnostic company
dedicated to providing diagnostic solutions for molecular
oncology and genetic testing. This workshop will discuss
groundbreaking new advances in Fragile X and FMR1 gene
testing.
AutoGenomics, Inc
The Emergence of KRAS & BRAF Mutation
Detection as a Critical Tool in Determining the Efficacy of
anti-EGFR Therapy
The integration of personalized medicine testing into
clinical practice is now providing clinicians with the
critical tools they require to assess the risks and benefits
associated with the optimal prescribing of medications. The
most recent example has been the FDA’s re-labeling of
Erbitux & Vectibix along with the recent guidelines from the
American Society of Clinical Oncology and the National
Comprehensive Cancer Network to include KRAS genetic testing
prior to beginning anti- EGFR therapy. This workshop will
address the utility of KRAS & BRAF genetic testing and the
clinical relevance for treatment of colorectal cancer
patients with these mutations.
BD Diagnostic GeneOhm 1
Real-world Experience: C. difficile Testing
With a Rapid Molecular Assay
BD GeneOhm is the leader in molecular testing for MRSA, C.
difficile and other pathogens that can cause HAIs. This year
BD was the first to launch real-time PCR testing for
toxigenic C. difficile. Learn about how this new assay will
revolutionize patient care and infection control for C.
difficile infection. Come hear real-world perspectives on
how implementation of the BD GeneOhm™ Cdiff assay is making
an impact by eliminating unnecessary re-testing, isolation,
and inappropriate treatment while providing a higher
standard of care.
BD Diagnostics GeneOhm 2 (with Handylab)
Redefining Molecular Testing in Medical Laboratories, a
Molecular Revolution
In this workshop you will learn about Group B Streptococcus
and Influenza assays on Jaguar as well as learning about HAI
testing on the BD MAX™. HandyLab and BD are working
together to commercialize nucleic acid based assays for
infectious diseases on the new Jaguar and BD MAX™ Systems,
automated molecular diagnostic testing platforms. The
collaboration widely expands automated testing for infection
testing programs in addition to numerous viral pathogens.
These systems provide greater flexibility and simplicity for
molecular testing in medical laboratories.
Cambridge Research & Instrumentation, Inc
Multicolor Molecular Imaging and Automated Tissue
Cytometry
Learn about unique new “intelligent” slide-analysis
solutions from CRi, combining powerful multispectral
capability with groundbreaking pattern-recognition image
analysis. The Nuance™ system can be used to accurately
separate overlapping signals, including autofluorescence,
from samples stained with multiple fluorescent or
immunohistochemical stains. Vectra™ is an automated
high-throughput system that includes CRi’s inForm™ software,
which uses a simple learn-by-example interface. It can
differentiate relevant tissue regions (e.g. malignant and
normal epithelia, stroma, and necrosis) and segment cellular
compartments (e.g. nuclei, cytoplasm, and membrane),
enabling detailed, spatially resolved multiparameter
quantitation. Key biological questions about tissue
composition or molecular phenotypical state can be answered,
supporting a broad range of preclinical and clinical
studies.
Cepheid, Inc
Advances in On-Demand Molecular Testing Using
the GeneXpert System
This workshop will focus on Cepheid’s GeneXpert® family of
advanced molecular diagnostic systems, including the new
GeneXpert Infinity–48 System. Discussions will be provided
by industry representatives and will highlight newly
introduced products like Xpert® C. difficile, including
important technology advances that will drive Cepheid’s
expanding menu of innovative Xpert tests. Additional
presentations will highlight Cepheid’s newly formed HAI
Consortium Initiative.
Cleveland Clinic Reference Laboratory
Molecular Testing in Hematolymphoid Neoplasms:
Using the 2008 WHO Classification
In this educational session, Dr. James Cook will discuss
molecular testing in routine hematopathology practice, with
an emphasis on recent changes in the 2008 WHO classification
of hematolymphoid neoplasms. Topics to be covered include
FLT3/NPM1 testing in acute myeloid leukemia (AML), FISH
panels in myelodysplasia and AML, JAK2 V617F mutations and
PDGFRA abnormalities in myeloproliferative neoplasms,
clonality testing using BIOMED2 primers in non-Hodgkin
lymphomas, and MYC translocations in Burkitt lymphoma and
diffuse large B-cell lymphoma. Discussion will include the
advantages and limitations of these techniques as well as
important interpretive caveats.
DxS with AltheaDx
Precision Medicine - Mutation Status and
Therapeutic Response
Recent studies show patient responses to targeted therapies,
such as anti-EGFR TKIs, are linked to gene mutations in cell
signaling pathways. KRAS mutations in colorectal cancer
patients are strongly correlated with a lack of response to
cetuximab and panitumumab. Conversely, the presence of EGFR
mutations in NSCLC patients is associated with a favorable
response to gefitinib and erlotinib. Consequently, there is
increasing demand upon the molecular pathologist to provide
mutation testing results from clinically validated qPCR
assays, to guide therapeutic decisions. Individualising
treatment choices for cancer patients fulfils the promise of
practicing efficacious and cost effective precision
medicine.
EraGen Biosciences
MultiCode® Technologies: A Novel Approach to
Molecular Testing in Infectious Diseases
In this workshop, fellow leaders in clinical laboratory
testing will present case studies that demonstrate the
versatility and broad application of EraGen Biosciences’
innovative MultiCode® technology. EraGen’s MultiCode®-RTx
technology has the advantage of generating both qualitative
and quantitative results on a wide variety of open platform
real-time PCR instruments. This workshop will demonstrate
the ease-of-use of the MultiCode® technology and is
important for clinical laboratories looking to expand their
molecular testing capabilities.
Focus Diagnostics
Focus & 3M System Introduction: New
Molecular Diagnostic Platform Validation in the 2009 H1N1
Flu Pandemic
Focus Diagnostics and 3M will present their joint experience
in developing a new molecular diagnostic system during the
advent of the current 2009 H1N1 influenza pandemic. A panel
of experts will present 1) an overview of the first
commercial H1N1 reference laboratory testing and subsequent
FDA emergency use authorization (EUA) of test kits, 2) PCR
technologies chosen for implementing the testing service and
evolution to test kit, and 3) the new Integrated Cycler from
3M and how it will change the way molecular testing is done
in the laboratory. Join this lunch discussion about how a
‘perfect storm’ of product development and epidemic resulted
in early release of a revolutionary molecular diagnostic
system.
Hologic, Inc
A Customer Experience Using the FDA Approved Cervista HPV
Tests
Hologic received approval for the Cervista HPV HR and
Cervista HPV 16/18 tests in March of 2009. Join us at our
workshop to hear a customer experience with implementing the
Cervista HPV tests and the positive impact these products
have had on their laboratory and the physicians they serve.
In addition, Hologic will provide an update on our HPV
automation program currently in development.
Idaho Technology, Inc 1
The FilmArray: User Friendly MultiPlex PCR
The FilmArray is user-friendly multiplex PCR. This
innovative system, by Idaho Technology, simplifies molecular
testing through a completely automated protocol, beginning
with integrated sample preparation and ending with automated
analysis of results. And it does it all in less than an
hour with less than 5 minutes of hands-on time. During this
workshop we will perform a live demonstration of the
FilmArray. We will also introduce you to the FilmArray
Respiratory Panel. The FilmArray respiratory panel is a
molecular diagnostic that detects 21 respiratory pathogens
in less than an hour - including sample prep. Come see how
easy molecular diagnostics can be.
Idaho Technology, Inc 2
High Resolution Melting Applications in
Infectious Diseases: HIV Sequence Diversity Assessment and
Genotyping of Drug Resistant Malaria-causing P. falciparum
Strains
In the past, measuring diversity of the HIV virus in an
infected person has been challenging at best. We developed
a novel LightScanner™ method based on Hi-Res Melting® peak
shape to measure the viral diversity present in a patient
sample.With nearly one million childhood deaths annually,
malaria continues to defeat eradication efforts, primarily
through increased resistance to common drug therapies. We
designed LunaProbe™ assays to genotype several mutations in
the P. falciparum genome that confer drug resistance. We
also developed a method to enrich the mutant allele such
that <1% can be detected with the LunaProbe.
iKaryos Diagnostics, Inc
SNP Array Karyotyping for Clinical Cancer
Applications
Chromosomal copy number alterations have been used to guide
the management of cancer patients for decades, and there are
many well-established, clinically validated applications for
such techniques. In addition, cancer cells have a propensity
to develop copy neutral loss-of-heterozygosity (LOH), which
is not detectable by conventional karyotyping, array
comparative genomic hybridization, or FISH. SNP array
karyotyping provides dramatically better resolution than
conventional karyotyping, does not require culture, performs
well on paraffin-embedded samples, and readily detects copy
neutral LOH, making it a powerful new addition to our
molecular oncology tool box. Examples of the clinical impact
of SNP array karyotyping will be presented and
considerations for routine clinical use of the platform will
be discussed.
Illumina, Inc 1
Using SNP Arrays to Identify Cytogenetic
Aberrations
As the adoption of SNP-based arrays continues to grow for
rapid whole-genome cytogenetic analysis, new questions
surface about workflow management and data analysis. In this
session, attendees will hear from an expert panel about
their experience addressing these issues and the results of
their research using SNP-based arrays for comprehensive
cytogenetic analysis.
Illumina, Inc 2
Illumina’s BeadXpress System – An Array of
Applications for the Molecular Laboratory
The difference between good data and great data is in the
code. Illumina’s VeraCodeâ technology combined with the
BeadXpressâ Reader delivers unparalleled data quality for a
multitude of bioassays, including multiplexed genotyping,
gene expression, methylation, and protein analysis. In this
session, attendees will learn about Illumina’s new ADME
product and hear from experienced end-users about assay
design and performance in their lab.
Illumina, Inc 3
Advances in Next Generation Sequencing –
Moving Basic Research to Clinical Diagnostics
Next generation sequencing (or “Now’” generation sequencing)
is rapidly changing the landscape of genetics, providing the
ability to answer questions with unimaginable speed.
Continuing advancements will provide inexpensive,
genome-wide data collection for a number of applications,
including complex diseases such as cancer. In this session,
attendees will learn how Illumina is approaching
translational medicine by utilizing the Genome Analyzer in
its cancer initiative, and hear from early adopters of the
technology.
Ipsogen, Inc.
Independent Method Comparison for JAK2 V617F Detection
at Henry Ford Hospital
A mutation in the JAK2 gene, V617F, has been
identified in several BCR/ABL negative myeloproliferative
neoplasms (MPN): polycythemia vera (95%), essential
thrombocythemia (50%), and primary myelofibrosis (50%).
Presence of V617F mutation is now part of clinical
diagnostic algorithms, necessitating familiarity with
available testing methods. In this workshop, Dr. Milena
Cankovic will describe her laboratory’s independent
evaluation of clinical performance of 3 screening methods
and 1 quantitative method for JAK2 V617F detection.
Screening for JAK2 mutations, measurement of allele burden,
and possibly minimal residual disease monitoring, are all
expected to play an increasingly important role in patient
management.
Luminex
Corporation
Luminex Diagnostic Assay - xTAG Respiratory
Viral Panel and Cystic Fibrosis Kit
Luminex Diagnostic Assays – Your Challenges, Our Solutions.
What we are doing to meet the needs of your lab, your
physicians and your patients both today and into the
future. Workshop highlighting the Luminex xTAG assays -
xTAG Respiratory Viral Panel and xTAG Cystic Fibrosis Kit.
Meridian Bioscience, Inc
Introduction to LAMP Technology and the illumigene
Platform
Meridian Bioscience, Inc. has developed a high
performing molecular assay for the detection of Clostridium
difficile in stool samples utilizing Loop Mediated
Isothermal Amplification (LAMP) technology. The illumigene™
assay provides a very simple testing procedure with low
hands-on time and rapid time to results. The workshop will
be an introduction to the illumigene™ assay including a
discussion of LAMP technology, a demonstration of the assay
process, an introduction to the illumipro-10™ instrument, as
well as a discussion of the projected illumigene™ product
pipeline.
Miltenyi Biotec, Inc
MACS® Technology for the Isolation of
Lineage-specific Cells Directly from Whole Blood for
Chimerism Analysis
This workshop presents MACS® Technology for the isolation of
cellular subsets from whole blood for downstream molecular
analyses. The analysis of lineage-specific cellular subsets
has been shown to be a powerful tool for the prediction of
success of allogeneic bone marrow transplantation in
chimerism monitoring. Specifically, analysis of T cells
allows for an early recognition of graft verses host disease
verses malignant recurrence. Combining the autoMACS™ Pro
Separator with Whole Blood MicroBeads provides a highly
efficient and reproducible method to isolate a variety of
cellular subsets from whole blood with high purity.
Nanosphere, Inc
Applications of Gold-Nanoparticle Technology
for Medical Diagnostics
Nanosphere, Inc. (Northbrook, IL, USA) has developed the
Verigene® System, which is comprised of instrumentation and
single use Verigene® Test Cartridges based on the company’s
laboratory-proven, gold nanoparticle technology. With the
Verigene System, users can accomplish sensitive, accurate,
and rapid multiplex detection of nucleic acid targets using
enhanced signal-amplification techniques. Several
FDA-cleared tests (IVDs) are available for use on the
Verigene System and others are in development. This
workshop will review both the currently available products
and provide a preview of future offerings.
NanoString Technologies, Inc
NanoString’s nCounter Analysis System: A
Highly Multiplexed Assay for Direct Detection of Nucleic
Acid Molecules Using Color-Coded Molecular Barcodes
We present a novel technology that captures and counts
individual nucleic acid molecules. The system is capable of
measuring up to 500 different nucleic acid species in a
single reaction without the need for enzymatic reactions or
amplification. The system is robust and flexible enough to
measure a variety of input materials including
formalin-fixed paraffin-embedded (FFPE) tissues, cell
lysates, and blood. The system has been used as a platform
for measuring multi-gene diagnostic expression signatures
and mRNA fusion-transcript biomarkers. Current efforts to
expand the platform to validate variations in genomic copy
number will be presented.
NorDiag, Inc
Low Cost Automation for the Purification of
Nucleic Acids from Stool and Urine, and a Novel Method of
Detection of Bacterial and Yeast Infections in Blood
NorDiag is a manufacturer of automated nucleic acid sample
preparation instruments designed for extraction from
difficult sample matrices using magnetic beads. NorDiag
will be demonstrating their ARROW instrument with automated
protocols for extraction and purification of nucleic acids
from stool, urine and sputum. NorDiag also distributes the
Molzym reagents that are used for detection of pathogens in
blood and culture.
Osmetech Molecular Diagnostics
The eSensor® XT-8 System: Warfarin Genetic Testing
and the Significance of CYP4F2 and the eSensor®
Respiratory Viral Panel
Recent literature has highlighted the
benefit of pharmacogenetic guided dosing of warfarin
for 46% of patients being initiated on warfarin with
the clinical objective of reaching the stable
therapeutic dose. An emerging genetic biomarker
affecting warfarin dose is CYP4F2 which can account
for an increase in warfarin dose of up to 1 1/2 mg
/day. The eSensor® Respiratory Viral Panel is a 19
target multiplex test for respiratory viruses
including swine flu with a sample to answer turn
around time of less than 6 hours. Osmetech Molecular
Diagnostics invites you to join us in reviewing
assay validation and performance on the company's
XT-8 instrument. The workshop will address the
utility of both tests and how they can be easily
performed on the XT-8. Warfarin Genetic Testing -
role of CYP 4F2 and eSensor QIAGEN ResPlex II v2.0
respiratory viral panel. |
PreAnalytiX 1
Use of the PAXgene(R) Blood RNA System and
Source MDx Precision Profiles™ for Gene Expression Profiling
in Subjects with Solid Tumors
Source MDx, the leader in RNA-based molecular diagnostics,
focuses on the development of diagnostic, prognostic, and
predictive RNA biomarkers in whole blood that measure
immune- and inflammation-related responses in cancer. Using
an integrated molecular diagnostic approach consisting of
the PAXgene Blood RNA System with Source MDx Precision
Profiles™, potential diagnostic, prognostic, and/or
predictive biomarkers have been identified in nine solid
tumor indications. Data from studies of subjects diagnosed
with various cancers and matched normal controls will be
presented.
PreAnalytiX 2
The PAXgene(R) Tissue System: Preservation
of Morphology and Molecular Content in Human Tissue
An integrated system for tissue fixation, stabilization, and
nucleic acid purification has been developed by PreAnalytiX
GmbH, a QIAGEN/BD company. The PAXgene Tissue System allows
researchers to perform histochemical analysis as well as
extraction of stabilized RNA, miRNA, and DNA from one
sample. Comparative data will be presented on
histomorphology and DNA, RNA, and miRNA content in a variety
of human normal and diseased tissues fixed in either the
PAXgene Tissue System or formalin. Results of
histochemical, immunohistochemical, FISH, CISH, RT PCR, qRT
PCR, PCR and qPCR analysis from paraffin embedded, PAXgene
or formalin fixed tissue will be shown.
Promega Corporation
The new Maxwell(R) 16 MDx System: A Better
Way to Automate Extraction of 1 to 16 Viral Total Nucleic
Acid Preps
Nucleic acid extraction continues to be an area where
enhanced workflow provides improvements in molecular
diagnostics lab productivity. The new Maxwell® 16 MDx
Instrument and Viral Total Nucleic Acid Extraction Kit
provide reliable and consistent extraction from 1 to 16
plasma, serum or swab samples for use in amplification-based
tests. Integration of bar-code sample tracking and
UV-light decontamination further enhance functionality of
the Maxwell® 16 MDx Instrument. This workshop will present
the latest information on the new Maxwell® 16 System and
user case studies relevant to molecular diagnostic labs who
want to improve laboratory workflow in a cost-effective
manner.
QIAGEN, Inc 1
HPV DNA Testing
QIAGEN will present an educational seminar on the importance
of HPV DNA testing and its role in managing cervical cancer
risk. For more than 8 years, the digene HPV HC2 DNA Test
has been widely used as one of the tools for eradicating
cervical cancer in women around the world. At this workshop,
speakers will address the importance of HPV testing for
patient care and the advantages of Hybrid Capture
technology. Speakers will also discuss the appropriate
utility of HPV genotyping, and its role in cervical disease
management according to current clinical guidelines.
QIAGEN, Inc
2
Pyrosequencing® Workflows in
the Lab
QIAGEN would like to invite you to this exciting talk on
Pyrosequencing® technology. Every day, laboratories are
looking to increase efficiency and impact of day to day
operations. This talk will discuss the laboratory workflow
from sample preparation through Pyrosequencing utilizing
QIAGEN’s chemistries and automation platforms. Automated
systems such as the QIAcube or QIAsymphony are used for
extraction, QIAgility for assay setup and a PyroMark system
for analysis. The presentation will focus on real world
usage of the Pyrosequencing workflow in a clinical
laboratory.
QIAGEN, Inc
3
Advances in the Automation of HPV Testing
As the demand for HPV testing continues to increase, so does
the need for highly automated solutions to process these
test requests. In particular, liquid based cytology (LBC)
samples are a particularly labor intensive sample type.
QIAGEN is pleased to introduce the QIAensemble SP which
provides a totally automated solution for the extraction of
DNA from LBC samples. In addition, QIAGEN will introduce the
HC 400 and the HC 2000 instruments that have the capacity to
process up to 2,000 HPV results in an eight hour shift.
These high throughput platforms have the ability to offer a
broad menu of assays utilizing a unique detection
technology.
Roche Applied Science
New Sequencing Technologies for Discovery in
the Clinical Research Market
The Genome Sequencer System was the first next generation
sequencing platform on the market to challenge the
traditional Sanger based technologies. Since its
introduction four years ago, the system has enabled over 500
peer reviewed publications in applications ranging from
amplicon resequencing for the identification of HIV
quasispecies to detect rare drug-resistant somatic mutations
and the identification of mutations involved in
carcinogenesis, to the sequencing of whole human genomes. At
AMP 2008, we presented novel sequencing assays to
characterize and generate high resolution genotype
information for HLA. At AMP 2009, we will introduce new
technologies that expand upon the GS FLX Titanium series 400
to 500 base-pair sequencing read lengths. These advancements
include improved amplicon sequencing strategies, sequencing
read lengths that approach 1000 base pairs, full length cDNA
sequencing, and more.
Roche Diagnostics Corporation
Roche Diagnostics Corporation: Molecular
Solutions for Improved Patient Care
Roche Diagnostics is a leader in molecular diagnostics that
delivers a wide range of products for the clinical
laboratory. Roche invites you to actively participate
during our interactive symposium where experts will provide
updates on topics such as HIV viral load testing,
health-care associated infection screening, K-RAS mutation
testing, and the new cobas 4800 system* currently in
development. You will contribute by providing insight based
on your expertise in laboratory and clinical diagnostics
with molecular methods. Roche Diagnostics’ solutions are
designed to bring innovation to laboratories that improve
both patient care and laboratory excellence.*The cobas 4800
system is currently in development and not available for
sale in the United States.
SABiosciences Corporation
High Sensitivity and High-fidelity Gene
Expression Analysis on FFPE Samples- A Technical Guide
Workshop
Paraffin-embedded tissues have been challenging for gene
expression based molecular pathology analysis, largely due
to the extensive RNA crosslinking and fragmentation. We
have thoroughly examined and optimized all steps in gene
expression analysis for paraffin embedded tissues. In this
workshop, we will report the optimized protocols as well as
the alternative methodologies we explored. RNA extraction
method, reverse transcription, transcript amplification, PCR
primer design strategies will be presented in this
comprehensive workshop on paraffin embedded tissues. We
will introduce FFPE PreAMP and RT2 PCR Array as the solution
for real-time PCR based analysis using paraffin embedded
tissues.
Sequenom, Inc
High-throughput Oncogene Mutation Profiling of Solid Tumors
Sequenom's mass spectrometry based method for nucleic acid
analysis, MassARRAY, is now considered to be the technology
of choice for the accurate and sensitive mutational analysis
of heterogeneous tumor samples. In this session, attendees
will hear how Drs. Chris Corless from OHSU and Marc Ladanyi
from MSKCC, have developed and applied quantitative mutation
panels for MassARRAY to interrogate multiple oncogene
mutations simultaneously to guide cancer classification and
rational therapeutic intervention.
SeraCare Life Sciences
Evaluating your New Test Methods: It’s NOT a
Regulatory Exercise!
When SeraCare presented this workshop in 2007, more than 80
of you attended, and your positive feedback has prompted us
to update the information and the examples and offer it
again.You need to know the strengths and weaknesses of your
new test, to set up your QC program, and minimize nasty
surprises. CLIA requires you to verify its performance. So
why not kill two birds with one stone? Using real-world
examples, we’ll talk about how to manage risks, organize a
real quality control program, increase your confidence in
your test methods, and deliver accurate results.
Siemens HealthCare Diagnostics
VERSANT® kPCR Sample Prep: Development of a
Versatile, Fully-automated System for the Isolation of
Nucleic Acids from Clinical Samples
The VERSANT® kPCR Sample Prep system is a fully-automated
platform developed for high yield and purity isolations of
nucleic acids from a variety of clinical sample types.
Purity and yield of nucleic acids are a prerequisite for
optimized performance of all target-amplification based
technologies used in the molecular diagnostic arena. The
Siemens’ technology utilizes highly uniform micro magnetic
particles (0.1 µm) coated with a nanolayer of silica. The
homogenous beads allow excellent reproducibility, nucleic
acid capture efficiency, and overall assay performance. This
innovative technology provides for the time efficient and
labor saving processing of large numbers of samples. The
universal DNA and RNA extraction protocol has been developed
to meet current as well as future molecular diagnostic
testing needs from a variety of sample matrices ranging from
liquids (e.g. serum, swabs) to tissue (e.g. formalin-fixed,
paraffin embedded tissue sections).
Signature Genomic Laboratories, LLC
New Advancements in Cancer Diagnostics by
Microarray
This workshop will describe new developments in array
technology as they apply to the diagnosis of malignancies.
Novel improvements in array designs and techniques with the
specific purpose of identifying all possible genomic
rearrangements in cancer will be illustrated. The
significant contribution of these technologies to the workup
of patients with hematological malignancies will be
demonstrated. In addition, the contribution of detecting
unsuspected genomic rearrangements to disease classification
and possibly treatment and prognosis will be discussed.
SmartGene, Inc
Sequence-based Identification of Bacteria and
Fungi: A Clinically Valuable, Technically Feasible
and Economically Appealing Approach
|
Sequencing is a useful tool for the rapid
and precise identification of challenging
pathogens. However, many laboratories are
reluctant to implement this capability due
to technical and economic concerns. At this
workshop, experts from two leading clinical
laboratories will describe their experiences
in performing sequence-based identification
of pathogens in a routine clinical setting,
with particular emphasis on the management,
analysis and interpretation of sequence
data. The session will also report on the
reimbursement level established by CMS for
2010 for the new CPT code "Culture, typing;
identification by nucleic acid sequencing
method, each isolate". Finally, a novel
approach for the creation and updating of
comprehensive reference sequence databases
will be presented. |
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